PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G436500.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 605aa    MW: 67526.7 Da    PI: 4.9491
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G436500.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-11356399755
                        HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         +ErrRR+++N+ +  Lr l+Pk +      K++ a+iL  A++++k+Lq
  Aqcoe1G436500.4.p 356 VAERRRRKKLNDMLYALRALVPKiS------KMDRASILGDAIDFVKELQ 399
                        68*********************66......******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.9E-199156IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000833.27E-13348403No hitNo description
PROSITE profilePS5088815.034349398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.95E-16354412IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-15355404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-16356411IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-9356399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.38E-5493559No hitNo description
CDDcd048731.65E-4497559No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
MGGFHNLLEK LRPFVGLNSW DYCVLWKLSE DQRFIEWVGC CCGGVDNNIQ NGGDELLFSV  60
STVLSCKDVM FQHSRTKNCD LLAQLPSFMP LDSGLHGHTL ISNQPRWINL PDFPNLSSSD  120
QETVGTKVLI PVFRGLVELF IAKQVSEDSQ LIEFVMAQCN VPWDQEAMNT QMDGFVMNDN  180
GIIGNESKLF PSNVFDSKTP SNLWASPAST TSDNLNLPWD VSLEQIRACN SPMNFFNGLG  240
QQFPSTSENR LKNDIGGFEC STESIMSDRP TTAFNSSAEH GFPEFVPLHQ SLMGNSTSLH  300
PSVDSCVTKQ PTTEKDSIKQ ESGRADSGSD CSDQNQNDDQ TTVGRGGKLH HSKNLVAERR  360
RRKKLNDMLY ALRALVPKIS KMDRASILGD AIDFVKELQK RVKDLQDELE DPSDENGDKN  420
KINNGDKNGI SPGAKSEQDE SLEGIKLGIT DQGNRCSSNG KITNCIKQTE DFMTAEEKPR  480
MEPQVEVTQI DGKKFYLKVF CENRPGGFVR LMEAMSSLGL EVTNVNVNTF RSLVMNVFKV  540
ERRDNEMVQP DFVRDSLLDI TRSPIGVWSE PFLVSENGSN LDYNHPQQAN PHRHRHLNSL  600
NLQA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1357364ERRRRKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002263966.20.0PREDICTED: transcription factor ABORTED MICROSPORES-like isoform X1
RefseqXP_010651162.10.0PREDICTED: transcription factor ABORTED MICROSPORES-like isoform X2
TrEMBLF6HHT70.0F6HHT7_VITVI; Putative uncharacterized protein
STRINGVIT_01s0127g00860.t011e-180(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.11e-125bHLH family protein